Protein Alignment HmgD and hmgb3

DIOPT Version :9

• Sequence 1: NP_001163244.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_001004888.1
• Gene: hmgb3 / 448228
• XenbaseID: XB-GENE-1002014
• Length: 202
• Species: Xenopus tropicalis
• Alignment Length: 110
• Identity: 43/110 - (39%)
• Similarity: 65/110 - (59%)
• Gaps: 12/110 - (10%)

  Fly     5 PKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD--KSEWEAKAAKAKDDYDRAV 67
            ||||.|.:.|:.:..|..||..||||.:.:|||:.||:|..:.|  |..:..||||.|:.|::.|
 Frog    93 PKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDGEKQPYNNKAAKLKEKYEKDV 157

  Fly    68 KEFEANGGSSAANGGGAKKRAKPAKKVAKKSKKEESDEDDDDESE 112
            .::::.|....|.|         |.|:|:| |:|:.|:||:||.|
 Frog   158 ADYKSKGKFDCAKG---------APKLARK-KEEDEDDDDEDEEE 192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_001163244.1	HMGB-UBF_HMG-box	5..68	CDD:238686	27/64 (42%)
hmgb3	NP_001004888.1	HMG-box	13..78	CDD:381793
		HMG_box	93..160	CDD:366139	28/66 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	1	1.000	-	-		FOG0000133
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR48112
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	4.020