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Protein Alignment HmgD and SoxN
DIOPT Version :9
Sequence 1: | NP_001163244.1 |
Gene: | HmgD / 37481 |
FlyBaseID: | FBgn0004362 |
Length: | 112 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001260269.1 |
Gene: | SoxN / 44275 |
FlyBaseID: | FBgn0029123 |
Length: | 761 |
Species: | Drosophila melanogaster |
Alignment Length: | 107 |
Identity: | 33/107 - (30%) |
Similarity: | 46/107 - (42%) |
Gaps: | 27/107 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 SDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEW-------EAKAAKA 59
:|:.|||::|:|:|....|..:..:||.:..:|::||.|..| ||.||. |||..:|
Fly 176 ADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQW---KDLSESEKRPFIDEAKRLRA 237
Fly 60 -----KDDYD----------RAVKEFEANGGSSAAN--GGGA 84
..||. ...||....||..... ||||
Fly 238 VHMKEHPDYKYRPRRKTKTLTKTKEKYPMGGLMPGQTVGGGA 279
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1641977at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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