Protein Alignment HmgD and tHMG2

DIOPT Version :9

• Sequence 1: NP_001163244.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_001163689.1
• Gene: tHMG2 / 42651
• FlyBaseID: FBgn0038979
• Length: 134
• Species: Drosophila melanogaster
• Alignment Length: 78
• Identity: 35/78 - (44%)
• Similarity: 54/78 - (69%)
• Gaps: 6/78 - (7%)

  Fly     1 MSD---KPKRPLSAYMLWLNS-ARESIKRENPGIKVTEVAKRGGELWRAMKD--KSEWEAKAAKA 59
            |||   :||:|:||:|||:|| .|::|:.|:|...|.||:.:|||:||||.|  |..|:..|:||
  Fly     2 MSDYGARPKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKA 66

  Fly    60 KDDYDRAVKEFEA 72
            ..:|...::::.|
  Fly    67 MAEYKEKLEKWNA 79

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_001163244.1	HMGB-UBF_HMG-box	5..68	CDD:238686	31/65 (48%)
tHMG2	NP_001163689.1	HMGB-UBF_HMG-box	9..75	CDD:238686	31/65 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	57	1.000	Domainoid score	I3986
eggNOG	1	0.900	-	-		E1_COG5648
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	55	1.000	Inparanoid score	I2031
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	5	4.870