Protein Alignment HmgD and hmg20b

DIOPT Version :9

• Sequence 1: NP_001163244.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: XP_017947143.1
• Gene: hmg20b / 394538
• XenbaseID: XB-GENE-5809048
• Length: 327
• Species: Xenopus tropicalis
• Alignment Length: 102
• Identity: 27/102 - (26%)
• Similarity: 50/102 - (49%)
• Gaps: 14/102 - (13%)

  Fly     5 PKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDDYDRAV 67
            ||.|::.|:.:||..||.|:.::|.:...|:.|..|..|..:  .:|..:..:|.:.|..|.:.:
 Frog    68 PKAPVTGYVRFLNERREQIRAQHPDLPFPEITKMLGAEWSTLPPHEKQRYLDEAERDKQQYMKEL 132

  Fly    68 KEFEANGGSSAANGGGAKKRAKPAKKV-AKKSKKEES 103
            :|::.:......           |:|: .||.||||:
 Frog   133 REYQQSEAYKMC-----------AEKIQEKKIKKEET 158

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_001163244.1	HMGB-UBF_HMG-box	5..68	CDD:238686	18/64 (28%)
hmg20b	XP_017947143.1	HMGB-UBF_HMG-box	68..133	CDD:238686	18/64 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910