Protein Alignment HmgD and sox17b.1

DIOPT Version :9

• Sequence 1: NP_001163244.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_988849.1
• Gene: sox17b.1 / 394440
• XenbaseID: XB-GENE-484865
• Length: 376
• Species: Xenopus tropicalis
• Alignment Length: 99
• Identity: 22/99 - (22%)
• Similarity: 49/99 - (49%)
• Gaps: 17/99 - (17%)

  Fly     6 KRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRA--MKDKSEWEAKAAKAKDDYDRAVK 68
            :||::|:|:|....|:.:.::||.:...|::|..|:.|::  :..|..:..:|.:.:..:.:...
 Frog    59 RRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLASKRPFVEEAERLRVQHIQDYP 123

  Fly    69 EFEANGGSSAANGGGAKKRAKPAKKVAKKSKKEE 102
            ::              |.|.: .||..|:.|:||
 Frog   124 DY--------------KYRPR-RKKQVKRMKREE 142

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_001163244.1	HMGB-UBF_HMG-box	5..68	CDD:238686	14/63 (22%)
sox17b.1	NP_988849.1	SOX-TCF_HMG-box	57..128	CDD:238684	15/82 (18%)
		PABP-1234	<80..250	CDD:130689	16/78 (21%)
		Required for transcriptional activity and interaction with ctnnb1. /evidence=ECO:0000250|UniProtKB:O42601	327..331

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920