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Protein Alignment HmgD and CG32202
DIOPT Version :9
Sequence 1: | NP_001163244.1 |
Gene: | HmgD / 37481 |
FlyBaseID: | FBgn0004362 |
Length: | 112 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_730354.2 |
Gene: | CG32202 / 326199 |
FlyBaseID: | FBgn0052202 |
Length: | 141 |
Species: | Drosophila melanogaster |
Alignment Length: | 94 |
Identity: | 25/94 - (26%) |
Similarity: | 44/94 - (46%) |
Gaps: | 19/94 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 LNSARESIKRENPGIKVTEVAKR----GGELWRAM-------KDKSEWEAKAAKAKDDYDRAVKE 69
:|..::.::|.|..: |:.|| .|:.||:: |.|:|.:.:..|.|: .:|..|
Fly 35 VNGIKKIVRRRNHDV---ELLKRRLDKHGDDWRSVPMEAPHPKGKTEQKRRGPKPKN--KQAADE 94
Fly 70 FEANGGSSAANGGGAKKRAKPAKKVAKKS 98
..|.|.....|...|: ||.|:.||::
Fly 95 TGAPGSEPGPNTPAAR---KPRKQKAKQA 120
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
HmgD | NP_001163244.1 |
HMGB-UBF_HMG-box |
5..68 |
CDD:238686 |
15/62 (24%) |
CG32202 | NP_730354.2 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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