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Protein Alignment HmgD and Hmgxb4
DIOPT Version :9
Sequence 1: | NP_001163244.1 |
Gene: | HmgD / 37481 |
FlyBaseID: | FBgn0004362 |
Length: | 112 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001100882.1 |
Gene: | Hmgxb4 / 307667 |
RGDID: | 1305783 |
Length: | 598 |
Species: | Rattus norvegicus |
Alignment Length: | 122 |
Identity: | 36/122 - (29%) |
Similarity: | 57/122 - (46%) |
Gaps: | 19/122 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 DKPKRP-LSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDDYD 64
:|||:. :|||.::....|.:|..::|||...|::|:..|:|:.: |||..|:.||...:...:
Rat 397 EKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYLQHKQN 461
Fly 65 RAVKEFEANGGSSAANGGGAKKRA------KPAKK--------VAKKSKKEESDEDD 107
:|.........|||. |..|.|| .|.|| .|..:|..|::..|
Rat 462 KAEATTVKRKASSAE--GTMKVRASSVGILSPQKKSPPTTMLLPASPAKAPETEPID 516
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1641977at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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