Protein Alignment HmgD and Bbx

DIOPT Version :9

• Sequence 1: NP_001163244.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: XP_008766856.1
• Gene: Bbx / 303970
• RGDID: 1309769
• Length: 938
• Species: Rattus norvegicus
• Alignment Length: 119
• Identity: 26/119 - (21%)
• Similarity: 50/119 - (42%)
• Gaps: 26/119 - (21%)

  Fly     4 KPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDDYDRA 66
            :.:||::|::|:....|..:::|:|.:......|...:.|..:  |:|.::...|.:.||.:
  Rat    79 RARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAF--- 140

  Fly    67 VKEFEANGG-----SSAANGGGAKKRAKPAKKV-------------AKKSKKEE 102
               .:||.|     ::............|.||:             |||:|.||
  Rat   141 ---MKANPGYRWCPTTNKPVKSPTPTVNPRKKLWAFPSDSSRDLPTAKKAKTEE 191

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_001163244.1	HMGB-UBF_HMG-box	5..68	CDD:238686	14/64 (22%)
Bbx	XP_008766856.1	SOX-TCF_HMG-box	79..150	CDD:238684	17/76 (22%)
		DUF2028	191..>323	CDD:312980	1/1 (100%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010