DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgD and Tox2

DIOPT Version :10

Sequence 1:NP_726109.1 Gene:HmgD / 37481 FlyBaseID:FBgn0004362 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_001359507.1 Gene:Tox2 / 269389 MGIID:3611233 Length:541 Species:Mus musculus


Alignment Length:100 Identity:27/100 - (27%)
Similarity:52/100 - (52%) Gaps:5/100 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDDYDR 65
            ::|::|:|||.|:....:.:||.:||.....:|:|....:|.::  :.|..::.|...||.:|.:
Mouse   270 NEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLK 334

  Fly    66 AVKEFEANGGSSAANGGGAKKRAK---PAKKVAKK 97
            |:..:.|:..|.:....|..|..:   |||.:..|
Mouse   335 ALAAYRASLVSKSPPDQGEAKNTQANPPAKMLPPK 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgDNP_726109.1 HMG-box_SSRP1-like 7..71 CDD:438810 18/65 (28%)
Tox2NP_001359507.1 HMG-box_TOX-like 273..342 CDD:438811 18/68 (26%)

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