DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgD and Tox4

DIOPT Version :10

Sequence 1:NP_726109.1 Gene:HmgD / 37481 FlyBaseID:FBgn0004362 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_075923.2 Gene:Tox4 / 268741 MGIID:1915389 Length:619 Species:Mus musculus


Alignment Length:73 Identity:21/73 - (28%)
Similarity:42/73 - (57%) Gaps:2/73 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDDYDR 65
            ::|::|:|||.|:....:.:||.:||.....||:|....:|.::  :.|..::.|...||.:|.:
Mouse   221 NEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLK 285

  Fly    66 AVKEFEAN 73
            |:..::.|
Mouse   286 ALAAYKDN 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgDNP_726109.1 HMG-box_SSRP1-like 7..71 CDD:438810 19/65 (29%)
Tox4NP_075923.2 NHP6B 140..>306 CDD:227935 21/73 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..227 1/5 (20%)
Nuclear localization signal. /evidence=ECO:0000255, ECO:0000269|PubMed:34914893 213..218
HMG-box_TOX-like 224..293 CDD:438811 19/68 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 306..335
Peptidase_S21 <464..530 CDD:330753
Blue background indicates that the domain is not in the aligned region.

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