Protein Alignment HmgD and nhp6

DIOPT Version :9

• Sequence 1: NP_001163244.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_593314.1
• Gene: nhp6 / 2542878
• PomBaseID: SPAC57A10.09c
• Length: 108
• Species: Schizosaccharomyces pombe
• Alignment Length: 97
• Identity: 29/97 - (29%)
• Similarity: 50/97 - (51%)
• Gaps: 6/97 - (6%)

  Fly     5 PKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAM--KDKSEWEAKAAKAKDDYDRAV 67
            |||.:||:|.:....||.:|.:||.....::....|:.|:.:  .::..:|.||.:.|:.|:|..
pombe    16 PKRNMSAFMFFSIENREKMKTDNPDATFGQLGSLLGKRWKELTSTEREPYEEKARQDKERYERER 80

  Fly    68 KEFEANGGSSAANGGGAKKRAKPAKKVAKKSK 99
            ||::    :..|||....|.:.||...|.|.:
pombe    81 KEYD----TKLANGEKTGKASAPAAAAAAKEE 108

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_001163244.1	HMGB-UBF_HMG-box	5..68	CDD:238686	19/64 (30%)
nhp6	NP_593314.1	NHP6B	<7..>108	CDD:227935	29/95 (31%)
		HMGB-UBF_HMG-box	16..81	CDD:238686	19/64 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	55	1.000	Inparanoid score	I2031
OMA	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000133
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100324
Panther	1	1.100	-	-	O	PTHR48112
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	5.860