Protein Alignment HmgD and SPBC28F2.11

DIOPT Version :9

• Sequence 1: NP_001163244.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_595672.1
• Gene: SPBC28F2.11 / 2540337
• PomBaseID: SPBC28F2.11
• Length: 310
• Species: Schizosaccharomyces pombe
• Alignment Length: 113
• Identity: 35/113 - (30%)
• Similarity: 56/113 - (49%)
• Gaps: 17/113 - (15%)

  Fly     4 KPKRPLSAYMLWLNSARESIKRENPGIK---VTEVAKRGGELWRAMK--DKSEWEAKAAKAKDDY 63
            :||||.|||.|:..:.|..|| |:.|.|   |.||.|...|.|.::.  |:..:|.:|:|.::.|
pombe   116 QPKRPPSAYNLFQKNQRSEIK-ESLGEKSNDVKEVNKAMHEKWGSLSEDDRKTYEEEASKLREAY 179

  Fly    64 DRAVKEFEANGGSSAANGGGAKKR-------AKPAKKVAKKSKKEESD 104
            :..:..:.|    |..|...|..|       .||::.::..:||:..|
pombe   180 EEEMAAYNA----SKENASVADSRVTAEETSTKPSEDLSSPTKKDLID 223

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_001163244.1	HMGB-UBF_HMG-box	5..68	CDD:238686	25/67 (37%)
SPBC28F2.11	NP_595672.1	NHP6B	<108..251	CDD:227935	35/113 (31%)
		HMGB-UBF_HMG-box	117..184	CDD:238686	25/67 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR48112
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.910