Protein Alignment HmgD and Tfam

DIOPT Version :9

• Sequence 1: NP_001163244.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_033386.1
• Gene: Tfam / 21780
• MGIID: 107810
• Length: 243
• Species: Mus musculus
• Alignment Length: 111
• Identity: 27/111 - (24%)
• Similarity: 50/111 - (45%)
• Gaps: 18/111 - (16%)

  Fly     1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD----------KSEWEAK 55
            |...||:|:|:|:.:........|.::|..|::|:.::...|||.:.:          |:||:|
Mouse    45 MGSYPKKPMSSYLRFSTEQLPKFKAKHPDAKLSELVRKIAALWRELPEAEKKVYEADFKAEWKA- 108

  Fly    56 AAKAKDDYDRAVKEFEANGGSSAANGGGAKKRAKPAKKVAKKSKKE 101
                   |..||.:::.....|...|...:.|.:..||.|...::|
Mouse   109 -------YKEAVSKYKEQLTPSQLMGMEKEARQRRLKKKALVKRRE 147

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_001163244.1	HMGB-UBF_HMG-box	5..68	CDD:238686	18/72 (25%)
Tfam	NP_033386.1	HMG_box	49..116	CDD:278906	19/74 (26%)
		HMGB-UBF_HMG-box	154..215	CDD:238686

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR48112
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.920