Protein Alignment HmgD and sox-3

DIOPT Version :10

• Sequence 1: NP_726109.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_510439.1
• Gene: sox-3 / 185534
• WormBaseID: WBGene00004950
• Length: 212
• Species: Caenorhabditis elegans
• Alignment Length: 61
• Identity: 19/61 - (31%)
• Similarity: 36/61 - (59%)
• Gaps: 4/61 - (6%)

  Fly     3 DKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEW----EAKAAKA 59
            |..|||::|:|:|....|..:.::||.:..:|::||.|..|:.:.::.:.    |||..:|
 Worm    46 DHVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKQLSEQEKRPFIDEAKRLRA 106

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_726109.1	HMG-box_SSRP1-like	7..71	CDD:438810	17/57 (30%)
sox-3	NP_510439.1	HMG-box_SoxB	46..125	CDD:438790	19/61 (31%)