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Protein Alignment HmgD and penr-1
DIOPT Version :10
| Sequence 1: | NP_726109.1 |
Gene: | HmgD / 37481 |
FlyBaseID: | FBgn0004362 |
Length: | 112 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_504410.1 |
Gene: | penr-1 / 178915 |
WormBaseID: | WBGene00015075 |
Length: | 317 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 44 |
Identity: | 11/44 - (25%) |
| Similarity: | 21/44 - (47%) |
Gaps: | 8/44 - (18%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 77 SAANGGGAKKRAKPAK--------KVAKKSKKEESDEDDDDESE 112
:|:|.|.:.|:.|.:: |..|:...:.||.:.:|..|
Worm 6 NASNAGSSPKKEKKSETFAALKSVKAEKRPAADSSDSEPEDFEE 49
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| HmgD | NP_726109.1 |
HMG-box_SSRP1-like |
7..71 |
CDD:438810 |
|
| penr-1 | NP_504410.1 |
None |
|
Blue background indicates that the domain is not in
the aligned region.
|
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