Protein Alignment HmgD and hmg-3

DIOPT Version :10

• Sequence 1: NP_726109.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_491688.1
• Gene: hmg-3 / 172250
• WormBaseID: WBGene00001973
• Length: 689
• Species: Caenorhabditis elegans
• Alignment Length: 115
• Identity: 46/115 - (40%)
• Similarity: 69/115 - (60%)
• Gaps: 9/115 - (7%)

  Fly     3 DKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMK--DKSEWEAKAAKAKDDYDR 65
            ::|||..:||::|.|:.|.|:|.:  |..:.:|||:.|..|::|.  ||.||..|||:.|..|:.
 Worm   559 NEPKRATTAYIIWFNANRNSMKED--GDTLGDVAKKAGAKWKSMSADDKKEWNDKAAQDKARYEA 621

  Fly    66 AVKEFEANGGS-SAANGGGAKKRA--KPAKKVAKKSKKEESDEDDDDESE 112
            .:||::.|||. ..|:|...||.:  .|.|:.  |||:..||.||.|:.|
 Worm   622 EMKEYKKNGGGVEKASGPSTKKSSDQSPGKQF--KSKEHISDTDDSDDDE 669

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_726109.1	HMG-box_SSRP1-like	7..71	CDD:438810	26/65 (40%)
hmg-3	NP_491688.1	POB3	20..497	CDD:227494
		HMG-box_SSRP1-like	563..627	CDD:438810	26/65 (40%)