Protein Alignment HmgD and hmg-3

DIOPT Version :9

• Sequence 1: NP_001163244.1
• Gene: HmgD / 37481
• FlyBaseID: FBgn0004362
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_491688.1
• Gene: hmg-3 / 172250
• WormBaseID: WBGene00001973
• Length: 689
• Species: Caenorhabditis elegans
• Alignment Length: 115
• Identity: 46/115 - (40%)
• Similarity: 69/115 - (60%)
• Gaps: 9/115 - (7%)

  Fly     3 DKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMK--DKSEWEAKAAKAKDDYDR 65
            ::|||..:||::|.|:.|.|:|.:  |..:.:|||:.|..|::|.  ||.||..|||:.|..|:.
 Worm   559 NEPKRATTAYIIWFNANRNSMKED--GDTLGDVAKKAGAKWKSMSADDKKEWNDKAAQDKARYEA 621

  Fly    66 AVKEFEANGGS-SAANGGGAKKRA--KPAKKVAKKSKKEESDEDDDDESE 112
            .:||::.|||. ..|:|...||.:  .|.|:.  |||:..||.||.|:.|
 Worm   622 EMKEYKKNGGGVEKASGPSTKKSSDQSPGKQF--KSKEHISDTDDSDDDE 669

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgD	NP_001163244.1	HMGB-UBF_HMG-box	5..68	CDD:238686	26/64 (41%)
hmg-3	NP_491688.1	POB3	20..497	CDD:227494
		SSrecog	75..285	CDD:281523
		PH2_SSRP1-like	332..429	CDD:270051
		HMGB-UBF_HMG-box	561..624	CDD:238686	26/64 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160101
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840