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Protein Alignment HmgD and Hmgb1

DIOPT Version :10

Sequence 1:	NP_726109.1	Gene:	HmgD / 37481	FlyBaseID:	FBgn0004362	Length:	112	Species:	Drosophila melanogaster
Sequence 2:	NP_034569.1	Gene:	Hmgb1 / 15289	MGIID:	96113	Length:	215	Species:	Mus musculus

Alignment Length:	110	Identity:	45/110 - (40%)
Similarity:	67/110 - (60%)	Gaps:	7/110 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 PKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWR--AMKDKSEWEAKAAKAKDDYDRAV 67
            ||||.||:.|:.:..|..||.|:||:.:.:|||:.||:|.  |..||..:|.||||.|:.|::.:
Mouse    95 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDI 159

  Fly    68 KEFEANGGSSAANGGGAKKRAKPAKKVAKKSKKEESDEDDDDESE 112
            ..:.|.|...||..|..|     |:|..||.::|:.:||::||.|
Mouse   160 AAYRAKGKPDAAKKGVVK-----AEKSKKKKEEEDDEEDEEDEEE 199

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

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