DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgZ and NHP6A

DIOPT Version :10

Sequence 1:NP_726106.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster
Sequence 2:NP_015377.1 Gene:NHP6A / 856165 SGDID:S000006256 Length:93 Species:Saccharomyces cerevisiae


Alignment Length:70 Identity:26/70 - (37%)
Similarity:39/70 - (55%) Gaps:2/70 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKMKEEYNKAV 68
            |||.|||||.:.||.|:.::.:||......:.|:.||.|:.|  ::|..:|.||...|:.|....
Yeast    21 PKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRYESEK 85

  Fly    69 KEYEA 73
            :.|.|
Yeast    86 ELYNA 90

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgZNP_726106.1 HMG-box_SSRP1-like 8..72 CDD:438810 22/65 (34%)
NHP6ANP_015377.1 HMG-box_NHP6-like 17..88 CDD:438792 24/66 (36%)

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