DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgZ and HMO1

DIOPT Version :10

Sequence 1:NP_726106.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster
Sequence 2:NP_010459.1 Gene:HMO1 / 851754 SGDID:S000002581 Length:246 Species:Saccharomyces cerevisiae


Alignment Length:137 Identity:33/137 - (24%)
Similarity:60/137 - (43%) Gaps:32/137 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PKRPLSAYMLWLNETREQIKKDN-----PGSKVTDIAKRGGELWRGLKD--KTEWEQKAIKMKEE 63
            ||:||:.:..:....|:::::|.     |....|:|.:...:.|:.|.|  |.:|:|......|.
Yeast   106 PKKPLTVFFAYSAYVRQELREDRQKAGLPPLSSTEITQEISKKWKELSDNEKEKWKQAYNVELEN 170

  Fly    64 YNKAVKEY-EA------------NGGTDSGA--PKKRKKAAAKPAKK----------AKKKESSE 103
            |.:...:| ||            ||.|.:..  |...:.||..|.:|          .|||:..:
Yeast   171 YQREKSKYLEAKKNGTLPPASLENGPTHAPVPIPFSLQHAAEPPVEKRPHDDDGSSEKKKKKKKK 235

  Fly   104 EEEEDES 110
            ::::|:|
Yeast   236 DKKKDKS 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgZNP_726106.1 HMG-box_SSRP1-like 8..72 CDD:438810 16/71 (23%)
HMO1NP_010459.1 NHP6B 36..246 CDD:227935 33/137 (24%)

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