DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgZ and SOX14

DIOPT Version :10

Sequence 1:NP_726106.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster
Sequence 2:NP_004180.1 Gene:SOX14 / 8403 HGNCID:11193 Length:240 Species:Homo sapiens


Alignment Length:90 Identity:23/90 - (25%)
Similarity:48/90 - (53%) Gaps:9/90 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLK--DKTEWEQKAIKMKEEYNK 66
            |..|||::|:|:|....|.::.::||....::|:||.|..|:.|.  :|..:..:|.:::.::.|
Human     6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMK 70

  Fly    67 AVKEYEANGGTDSGAPKKRKKAAAK 91
            ...:|:..       |:::.|...|
Human    71 EHPDYKYR-------PRRKPKNLLK 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgZNP_726106.1 HMG-box_SSRP1-like 8..72 CDD:438810 17/65 (26%)
SOX14NP_004180.1 HMG-box_SoxB 6..85 CDD:438790 21/85 (25%)
SOXp 77..>118 CDD:463537 3/19 (16%)

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