Protein Alignment HmgZ and HMGB2

DIOPT Version :10

• Sequence 1: NP_726106.1
• Gene: HmgZ / 37480
• FlyBaseID: FBgn0010228
• Length: 111
• Species: Drosophila melanogaster
• Sequence 2: NP_564123.1
• Gene: HMGB2 / 838658
• AraportID: AT1G20693
• Length: 144
• Species: Arabidopsis thaliana
• Alignment Length: 112
• Identity: 40/112 - (35%)
• Similarity: 65/112 - (58%)
• Gaps: 9/112 - (8%)

  Fly     4 DRPKRPLSAYMLWLNETREQIKKDNPGSK-VTDIAKRGGELWRGLKD--KTEWEQKAIKMKEEYN 65
            ::||||.||:.:::.:.||..||:||.:| |..:.|..|:.|:.|.|  |..:..||.|.|.||.
plant    36 NKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYE 100

  Fly    66 KAVKEYEANGGTDSGAPKKRK---KAAAKPAKKAKKKESSEEEEEDE 109
            |.:|.|  |...:.| ||:.:   |:.::...:...::.|||||:|:
plant   101 KNIKAY--NKKLEEG-PKEDEESDKSVSEVNDEDDAEDGSEEEEDDD 144

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgZ	NP_726106.1	HMG-box_SSRP1-like	8..72	CDD:438810	26/66 (39%)
HMGB2	NP_564123.1	HMG-box_AtHMGB1-like	39..99	CDD:438821	23/59 (39%)