DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgZ and SOX7

DIOPT Version :10

Sequence 1:NP_726106.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster
Sequence 2:NP_113627.1 Gene:SOX7 / 83595 HGNCID:18196 Length:388 Species:Homo sapiens


Alignment Length:128 Identity:25/128 - (19%)
Similarity:58/128 - (45%) Gaps:29/128 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SGDRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRG--LKDKTEWEQKAIKMKEEY 64
            |..|.:||::|:|:|..:.|:::...||.....:::|..|:.|:.  |..|..:..:|.:::.::
Human    41 SESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQH 105

  Fly    65 NKAVKEYEANGGTDSGAPKKRKKAA--------------------AKPAKKAKKKESSEEEEE 107
            .:....|:..       |:::|:|.                    |.|.|::..:.:..|:|:
Human   106 MQDYPNYKYR-------PRRKKQAKRLCKRVDPGFLLSSLSRDQNALPEKRSGSRGALGEKED 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgZNP_726106.1 HMG-box_SSRP1-like 8..72 CDD:438810 14/65 (22%)
SOX7NP_113627.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..46 2/4 (50%)
HMG-box_SoxF_SOX7 34..121 CDD:438849 18/86 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 140..197 5/22 (23%)
Sox17_18_mid <198..230 CDD:463454
Blue background indicates that the domain is not in the aligned region.

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