DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgZ and SOX9

DIOPT Version :10

Sequence 1:NP_726106.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster
Sequence 2:NP_000337.1 Gene:SOX9 / 6662 HGNCID:11204 Length:509 Species:Homo sapiens


Alignment Length:112 Identity:28/112 - (25%)
Similarity:54/112 - (48%) Gaps:20/112 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SGDRP--KRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKMKE 62
            |.::|  |||::|:|:|....|.::....|.....:::|..|:|||.|  .:|..:.::|.:::.
Human    99 SKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRV 163

  Fly    63 EYNKAVKEYEANGGTDSGAPKKRKKAAAKPAKKAKKKESSEEEEEDE 109
            ::.|...:|:..       |::||..         |...:|.||..|
Human   164 QHKKDHPDYKYQ-------PRRRKSV---------KNGQAEAEEATE 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgZNP_726106.1 HMG-box_SSRP1-like 8..72 CDD:438810 16/65 (25%)
SOX9NP_000337.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..67
Sox_N 22..94 CDD:463586
Dimerization (DIM). /evidence=ECO:0000305|PubMed:31194875 63..103 1/3 (33%)
PQA. /evidence=ECO:0000305|PubMed:31194875 63..103 1/3 (33%)
HMG-box_SoxE 104..178 CDD:438840 19/80 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..273 10/51 (20%)
Transactivation domain (TAM). /evidence=ECO:0000269|PubMed:31194875 224..307
9aaTAD 1. /evidence=ECO:0000269|PubMed:31194875 275..284
9aaTAD 2. /evidence=ECO:0000269|PubMed:31194875 290..298
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 330..415
Transactivation domain (TAC). /evidence=ECO:0000269|PubMed:8640233 394..509
9aaTAD 3. /evidence=ECO:0000269|PubMed:34342803 460..468
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 479..509
Blue background indicates that the domain is not in the aligned region.

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