DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgZ and SOX17

DIOPT Version :10

Sequence 1:NP_726106.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster
Sequence 2:NP_071899.1 Gene:SOX17 / 64321 HGNCID:18122 Length:414 Species:Homo sapiens


Alignment Length:98 Identity:22/98 - (22%)
Similarity:53/98 - (54%) Gaps:14/98 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRG--LKDKTEWEQKAIKMKEEYNKA 67
            |.:||::|:|:|..:.|:::.:.||.....:::|..|:.|:.  |.:|..:.::|.:::.::.:.
Human    67 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQD 131

  Fly    68 VKEYEANGGTDSGAPKKRKKAAAKPAKKAKKKE 100
            ...|:..       |::||:     .|:.|:.|
Human   132 HPNYKYR-------PRRRKQ-----VKRLKRVE 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgZNP_726106.1 HMG-box_SSRP1-like 8..72 CDD:438810 14/65 (22%)
SOX17NP_071899.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..66
HMG-box_SoxF_SOX17 62..142 CDD:438850 17/81 (21%)
Sox17_18_mid 203..253 CDD:463454
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 256..286
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..352
9aaTAD. /evidence=ECO:0000269|PubMed:34342803 361..369
Blue background indicates that the domain is not in the aligned region.

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