DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgZ and LOC5667882

DIOPT Version :10

Sequence 1:NP_726106.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster
Sequence 2:XP_061514536.1 Gene:LOC5667882 / 5667882 VectorBaseID:AGAMI1_003730 Length:355 Species:Anopheles gambiae


Alignment Length:100 Identity:30/100 - (30%)
Similarity:50/100 - (50%) Gaps:16/100 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKD--KTEWEQKAIKMKEEYNKAVK 69
            |||::|:|:|....|.||.||||....::|:||.|..|:.|.:  |..:..:|.:::..:.|...
Mosquito   111 KRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGSEWKLLTEAQKRPFIDEAKRLRATHMKEHP 175

  Fly    70 EYE--------------ANGGTDSGAPKKRKKAAA 90
            :|:              |||....||.::..||.:
Mosquito   176 DYKYRPRRKPKNPLASAANGLGALGAMQQNGKAGS 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgZNP_726106.1 HMG-box_SSRP1-like 8..72 CDD:438810 21/65 (32%)
LOC5667882XP_061514536.1 None

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