DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgZ and Sox102F

DIOPT Version :10

Sequence 1:NP_726106.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster
Sequence 2:XP_061505327.1 Gene:Sox102F / 5666784 VectorBaseID:AGAMI1_005164 Length:990 Species:Anopheles gambiae


Alignment Length:136 Identity:30/136 - (22%)
Similarity:51/136 - (37%) Gaps:48/136 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWR---GLKDKTEWEQKAIKMKEEYNK-- 66
            |||::|:|:|..:.|.:|.|..|....::|:|..|..|:   .|:.:..:|::|...|:...|  
Mosquito   861 KRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMTNLEKQPYYEEQAKLSKQHMEKHP 925

  Fly    67 -------------------AVKEYEA-----------------NGGTDSGAPKKRKKAAAKPAKK 95
                               .:.||:.                 :.|||       :|...|.|.|
Mosquito   926 DYRYRPRPKRTCIIDGKKMRISEYKCLMKNRRQEIRQFWTRDYDSGTD-------QKCPMKDAGK 983

  Fly    96 AKKKES 101
            ..|.|:
Mosquito   984 VIKNEA 989

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgZNP_726106.1 HMG-box_SSRP1-like 8..72 CDD:438810 19/87 (22%)
Sox102FXP_061505327.1 None

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