DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgZ and tox4a

DIOPT Version :10

Sequence 1:NP_726106.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster
Sequence 2:NP_001428573.1 Gene:tox4a / 559853 ZFINID:ZDB-GENE-070912-576 Length:685 Species:Danio rerio


Alignment Length:92 Identity:25/92 - (27%)
Similarity:49/92 - (53%) Gaps:2/92 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKMKEEYNK 66
            :.|::|:|||.|:..:|:..||..||.:...:::|....:|..|  :.|..:::|....|::|.|
Zfish   298 NEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKDYLK 362

  Fly    67 AVKEYEANGGTDSGAPKKRKKAAAKPA 93
            |:..|.|:..:.|.:..:....|..|:
Zfish   363 ALAAYRASQLSKSSSELEDSAPATPPS 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgZNP_726106.1 HMG-box_SSRP1-like 8..72 CDD:438810 19/65 (29%)
tox4aNP_001428573.1 None

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