Protein Alignment HmgZ and RGD1559962

DIOPT Version :9

• Sequence 1: NP_001286694.1
• Gene: HmgZ / 37480
• FlyBaseID: FBgn0010228
• Length: 111
• Species: Drosophila melanogaster
• Sequence 2: XP_008756867.1
• Gene: RGD1559962 / 498988
• RGDID: 1559962
• Length: 209
• Species: Rattus norvegicus
• Alignment Length: 108
• Identity: 47/108 - (43%)
• Similarity: 66/108 - (61%)
• Gaps: 7/108 - (6%)

  Fly     6 PKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELW--RGLKDKTEWEQKAIKMKEEYNKAV 68
            ||||.||:.|:.:|.|.:||.::||..:.|.||:.||:|  :..|||..:||||.|:||||.|.:
  Rat    95 PKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEEYEKDI 159

  Fly    69 KEYEANGGTDSGAPKKRKKAAAKPAKKAKKKESSEEEEEDESE 111
            ..|.|.|.::.|     ||...:|....||.|..:||||:|.:
  Rat   160 AAYRAKGKSEVG-----KKGPGRPTGSKKKNEPEDEEEEEEED 197

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgZ	NP_001286694.1	HMG_box	6..71	CDD:395407	32/66 (48%)
RGD1559962	XP_008756867.1	HMG-box	7..78	CDD:294061
		HMG_box	95..162	CDD:278906	32/66 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	1	1.000	-	-		FOG0000133
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.820