Protein Alignment HmgZ and hmgb2b

DIOPT Version :9

• Sequence 1: NP_001286694.1
• Gene: HmgZ / 37480
• FlyBaseID: FBgn0010228
• Length: 111
• Species: Drosophila melanogaster
• Sequence 2: NP_001004674.1
• Gene: hmgb2b / 447936
• ZFINID: ZDB-GENE-040912-122
• Length: 214
• Species: Danio rerio
• Alignment Length: 112
• Identity: 43/112 - (38%)
• Similarity: 65/112 - (58%)
• Gaps: 6/112 - (5%)

  Fly     6 PKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELW--RGLKDKTEWEQKAIKMKEEYNKAV 68
            ||||.||:.::.:|.|..:|.::|...:.:|||:.||||  :..||:..:||||.|::|:|.|.|
Zfish    97 PKRPPSAFFVFCSEYRPTVKSEHPNLTIGEIAKKLGELWSKQSSKDRAPFEQKAGKLREKYEKEV 161

  Fly    69 KEYEANGGTDSGAPKKR----KKAAAKPAKKAKKKESSEEEEEDESE 111
            ..|.|.||.....|.:.    ||:.|:......:.|..|:||:||.|
Zfish   162 AAYRAGGGASKRGPGRPTGSVKKSQAEADDDDDEDEDEEDEEDDEEE 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgZ	NP_001286694.1	HMG_box	6..71	CDD:395407	28/66 (42%)
hmgb2b	NP_001004674.1	HMG_box_2	7..78	CDD:286146
		HMG_box	97..164	CDD:278906	28/66 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	1	1.000	-	-		FOG0000133
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.920