Protein Alignment HmgZ and TFAM

DIOPT Version :10

• Sequence 1: NP_726106.1
• Gene: HmgZ / 37480
• FlyBaseID: FBgn0010228
• Length: 111
• Species: Drosophila melanogaster
• Sequence 2: NP_732527.1
• Gene: TFAM / 42433
• FlyBaseID: FBgn0038805
• Length: 284
• Species: Drosophila melanogaster
• Alignment Length: 105
• Identity: 25/105 - (23%)
• Similarity: 51/105 - (48%)
• Gaps: 6/105 - (5%)

  Fly     5 RPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRG----LKDKTEWEQKAIKMKEEYN 65
            |||:||:.|..::.|.|.::|..||.....::.::..:.|..    ||::.:.|.|  :.::.|.
  Fly    77 RPKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLSKNWSDADAQLKERLQAEFK--RDQQIYV 139

  Fly    66 KAVKEYEANGGTDSGAPKKRKKAAAKPAKKAKKKESSEEE 105
            :...:|:|....:..|..|:.|.....||:.::.....:|
  Fly   140 EERTKYDATLTEEQRAEIKQLKQDLVDAKERRQLRKRVKE 179

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgZ	NP_726106.1	HMG-box_SSRP1-like	8..72	CDD:438810	14/67 (21%)
TFAM	NP_732527.1	HMG-box_SF	78..138	CDD:469606	15/61 (25%)
		HMG-box_SF	168..263	CDD:469606	2/12 (17%)