DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgZ and tox2

DIOPT Version :10

Sequence 1:NP_726106.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster
Sequence 2:XP_017211947.1 Gene:tox2 / 405844 ZFINID:ZDB-GENE-040426-2095 Length:459 Species:Danio rerio


Alignment Length:94 Identity:27/94 - (28%)
Similarity:51/94 - (54%) Gaps:4/94 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKMKEEYNK 66
            :.|::|:|||.|:..:|:..||..||.:...|::|....:|..|  :.|..:::|....|:||.|
Zfish   200 NEPQKPVSAYALFFRDTQAAIKGQNPNATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLK 264

  Fly    67 AVKEYEAN--GGTDSGAPKKRKKAAAKPA 93
            |:..|.|:  ..|.|...:.:...:::|:
Zfish   265 ALAAYRASLVSKTYSDPVESKSAQSSQPS 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgZNP_726106.1 HMG-box_SSRP1-like 8..72 CDD:438810 21/65 (32%)
tox2XP_017211947.1 HMG-box_TOX-like 203..272 CDD:438811 22/68 (32%)
PHA03247 <253..424 CDD:223021 11/41 (27%)

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