DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgZ and ubtfl

DIOPT Version :10

Sequence 1:NP_726106.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster
Sequence 2:NP_957297.2 Gene:ubtfl / 393978 ZFINID:ZDB-GENE-040426-1159 Length:719 Species:Danio rerio


Alignment Length:99 Identity:24/99 - (24%)
Similarity:47/99 - (47%) Gaps:5/99 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKDK--TEWEQKAIKMKEEYNK 66
            |.|::|.:...||.|..::...|.:|.....::.:.....|..|.||  .:|..||:::::.|..
Zfish   196 DLPEKPKTPQQLWYNHEKKTYMKIHPEVSQKELKEALRRQWSQLSDKKRLKWISKALELQKHYED 260

  Fly    67 AVKEY-EANGGTDSGAPKKRKKAAAKPAKKAKKK 99
            .::.| ||:  .|:.:.:..|....|..::.|.|
Zfish   261 TMRAYIEAH--PDANSDEHVKSVLTKAERQLKDK 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgZNP_726106.1 HMG-box_SSRP1-like 8..72 CDD:438810 15/66 (23%)
ubtflNP_957297.2 None

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