DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgZ and Bap111

DIOPT Version :10

Sequence 1:NP_726106.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster
Sequence 2:NP_572530.1 Gene:Bap111 / 31846 FlyBaseID:FBgn0030093 Length:749 Species:Drosophila melanogaster


Alignment Length:121 Identity:29/121 - (23%)
Similarity:53/121 - (43%) Gaps:15/121 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKMKEEYNKAV 68
            |::|:..||.:.....:.:|..:|..|:.::.|:.|.:|:.|  .:|||:..:....|.||.|::
  Fly    89 PEKPILPYMRYSKRVWDSVKAKHPELKLWELGKKIGAMWKLLPEDEKTEFIDEYEAEKLEYEKSL 153

  Fly    69 KEYEANGGTDSGAPKKRKKAA-----AKPAKKAKKKESSE--------EEEEDESE 111
            |.|.......:....|.|...     ..|::....|...|        |:|:|:.|
  Fly   154 KAYHQTPAYQAYMSAKSKVKTDVDMHETPSRGGGSKSQHERRIDIQPAEDEDDQDE 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgZNP_726106.1 HMG-box_SSRP1-like 8..72 CDD:438810 18/65 (28%)
Bap111NP_572530.1 HMG-box_SMARCE1 93..157 CDD:438799 17/63 (27%)

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