DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgZ and SOX8

DIOPT Version :10

Sequence 1:NP_726106.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster
Sequence 2:NP_055402.2 Gene:SOX8 / 30812 HGNCID:11203 Length:446 Species:Homo sapiens


Alignment Length:86 Identity:23/86 - (26%)
Similarity:46/86 - (53%) Gaps:9/86 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKMKEEYNKAVK 69
            |||::|:|:|....|.::....|.....:::|..|:|||.|  .:|..:.::|.:::.::.|...
Human   103 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHP 167

  Fly    70 EYEANGGTDSGAPKKRKKAAA 90
            :|:..       |::||.|.|
Human   168 DYKYQ-------PRRRKSAKA 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgZNP_726106.1 HMG-box_SSRP1-like 8..72 CDD:438810 16/65 (25%)
SOX8NP_055402.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58
Sox_N 18..89 CDD:463586
Dimerization (DIM). /evidence=ECO:0000303|PubMed:31194875 58..100
HMG-box_SoxE 101..175 CDD:438840 19/78 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..259 8/34 (24%)
Transactivation domain (TAM). /evidence=ECO:0000303|PubMed:31194875 224..298
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..378
Transactivation domain (TAC). /evidence=ECO:0000303|PubMed:31194875 335..446
9aaTAD. /evidence=ECO:0000269|PubMed:34342803 400..408
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..446
Blue background indicates that the domain is not in the aligned region.

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