Protein Alignment HmgZ and Hmgb1

DIOPT Version :9

• Sequence 1: NP_001286694.1
• Gene: HmgZ / 37480
• FlyBaseID: FBgn0010228
• Length: 111
• Species: Drosophila melanogaster
• Sequence 2: XP_038945039.1
• Gene: Hmgb1 / 25459
• RGDID: 2802
• Length: 486
• Species: Rattus norvegicus
• Alignment Length: 108
• Identity: 46/108 - (42%)
• Similarity: 68/108 - (62%)
• Gaps: 5/108 - (4%)

  Fly     6 PKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWR--GLKDKTEWEQKAIKMKEEYNKAV 68
            ||||.||:.|:.:|.|.:||.::||..:.|:||:.||:|.  ...||..:|:||.|:||:|.|.:
  Rat   366 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDI 430

  Fly    69 KEYEANGGTDSGAPKKRKKAAAKPAKKAKKKESSEEEEEDESE 111
            ..|.|.|..|:.   |:....|:.:||.|::|..||:||||.|
  Rat   431 AAYRAKGKPDAA---KKGVVKAEKSKKKKEEEDDEEDEEDEEE 470

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgZ	NP_001286694.1	HMG_box	6..71	CDD:395407	29/66 (44%)
Hmgb1	XP_038945039.1	HMG_box_2	277..349	CDD:401091
		HMG_box	366..433	CDD:395407	29/66 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	1	1.000	-	-		FOG0000133
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.920