Protein Alignment HmgZ and sox-3

DIOPT Version :10

• Sequence 1: NP_726106.1
• Gene: HmgZ / 37480
• FlyBaseID: FBgn0010228
• Length: 111
• Species: Drosophila melanogaster
• Sequence 2: NP_510439.1
• Gene: sox-3 / 185534
• WormBaseID: WBGene00004950
• Length: 212
• Species: Caenorhabditis elegans
• Alignment Length: 88
• Identity: 23/88 - (26%)
• Similarity: 49/88 - (55%)
• Gaps: 9/88 - (10%)

  Fly     4 DRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKMKEEYNK 66
            |..|||::|:|:|....|.::.:|||....::|:||.|..|:.|  ::|..:..:|.:::..:.|
 Worm    46 DHVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKQLSEQEKRPFIDEAKRLRALHMK 110

  Fly    67 AVKEYEANGGTDSGAPKKRKKAA 89
            ...:|:..       |:::.|::
 Worm   111 EHPDYKYR-------PRRKPKSS 126

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgZ	NP_726106.1	HMG-box_SSRP1-like	8..72	CDD:438810	18/65 (28%)
sox-3	NP_510439.1	HMG-box_SoxB	46..125	CDD:438790	22/85 (26%)