Protein Alignment HmgZ and hmg-1.1

DIOPT Version :10

• Sequence 1: NP_726106.1
• Gene: HmgZ / 37480
• FlyBaseID: FBgn0010228
• Length: 111
• Species: Drosophila melanogaster
• Sequence 2: NP_001370073.1
• Gene: hmg-1.1 / 175081
• WormBaseID: WBGene00001971
• Length: 95
• Species: Caenorhabditis elegans
• Alignment Length: 67
• Identity: 30/67 - (44%)
• Similarity: 40/67 - (59%)
• Gaps: 2/67 - (2%)

  Fly     6 PKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKDKTEWEQKAIKMKEEYNKAVKE 70
            |||.:||:..|:.|.||:|||  ||..|.|:||..|..|..|.||:.||:||...|:.|...:..
 Worm    28 PKRAMSAFFFWMQENRERIKK--PGMGVADVAKAAGVEWGKLTDKSRWEKKAADDKKRYEVDIAN 90

  Fly    71 YE 72
            |:
 Worm    91 YK 92

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgZ	NP_726106.1	HMG-box_SSRP1-like	8..72	CDD:438810	27/63 (43%)
hmg-1.1	NP_001370073.1	HMG-box_SF	15..91	CDD:469606	29/64 (45%)