Protein Alignment HmgZ and sem-2

DIOPT Version :10

• Sequence 1: NP_726106.1
• Gene: HmgZ / 37480
• FlyBaseID: FBgn0010228
• Length: 111
• Species: Drosophila melanogaster
• Sequence 2: NP_740846.1
• Gene: sem-2 / 172162
• WormBaseID: WBGene00004771
• Length: 404
• Species: Caenorhabditis elegans
• Alignment Length: 126
• Identity: 32/126 - (25%)
• Similarity: 61/126 - (48%)
• Gaps: 18/126 - (14%)

  Fly     2 SGDRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKDK------TEWEQKAIKM 60
            |.:..|||::|:|:|....|.:|.:..|.....:|:|:.|..||.|.|:      .|.|:..:..
 Worm    89 SSNHIKRPMNAFMVWSQMERRKICEHQPDMHNAEISKQLGSRWRSLTDEEKAPFVAEAERLRVCH 153

  Fly    61 KEEY----NKAVKEYEAN-GGT-----DSGAPKKRK--KAAAKPAKKAKKKESSEEEEEDE 109
            .:||    .|..|:.:.| .||     ...||::::  ...|.|..:.:|:.:::::.|.:
 Worm   154 MQEYPDYKYKPRKKPKKNPDGTLQQPAQPQAPQQQQAPPRGASPQARQRKRPNTDQQSETQ 214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HmgZ	NP_726106.1	HMG-box_SSRP1-like	8..72	CDD:438810	21/73 (29%)
sem-2	NP_740846.1	HMG-box_SoxC	92..159	CDD:438838	20/66 (30%)