DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgZ and LOC1271977

DIOPT Version :10

Sequence 1:NP_726106.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster
Sequence 2:XP_061513506.1 Gene:LOC1271977 / 1271977 VectorBaseID:AGAMI1_008050 Length:816 Species:Anopheles gambiae


Alignment Length:169 Identity:34/169 - (20%)
Similarity:60/169 - (35%) Gaps:41/169 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 WNYRTDLLKQLQTETTERIKNRTMEDAMLG-----------LEQSWAKITPLAIRNAWDKLITDT 389
            |:.|..|.:..||....:.::....|.|:.           |:.||....|    |...:...:.
Mosquito   225 WHLRARLHRLSQTAKLRKSEDIGKNDFMMSKNSCLDLKTCQLDVSWCTDYP----NEQIQFFLEN 285

  Fly   390 DQYVVENEIVDASSVEGMMLVDHETDLVEEVEDMDDDIEEVEEIIQFTDDIEQVEEVEQFDHVAP 454
            ....|.||:|               ||:.|:.  ..:||......||.  .....:.|| .|:..
Mosquito   286 SDDWVHNEVV---------------DLIVELN--PSEIEMTFMTCQFC--FHYAGKREQ-GHILS 330

  Fly   455 I--EQVDVINHHQQEQEQEQEQEQHEEQ--NMMV--NWI 487
            :  :.:|:|::......|::....:.|:  .||.  ||:
Mosquito   331 VMEKYLDLISNDLHRYYQDKGIRNYTERVTKMMKINNWL 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgZNP_726106.1 HMG-box_SSRP1-like 8..72 CDD:438810
LOC1271977XP_061513506.1 None
Blue background indicates that the domain is not in the aligned region.

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