DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgZ and LOC1271029

DIOPT Version :10

Sequence 1:NP_726106.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster
Sequence 2:XP_061513404.1 Gene:LOC1271029 / 1271029 VectorBaseID:AGAMI1_001276 Length:216 Species:Anopheles gambiae


Alignment Length:111 Identity:30/111 - (27%)
Similarity:50/111 - (45%) Gaps:29/111 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SGDRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKDKTEWEQ----------K 56
            :|:..|||::|:|:|....|.::.:|||....::|:|..|..|:.|   ||.|:          :
Mosquito    15 AGEHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKNLGAQWKLL---TEGEKRPFIDEAKRLR 76

  Fly    57 AIKMKEEYNKAVKEYEANGGTDSGAPKKRKKAAAKPAKKAKKKESS 102
            |:.|||.     .:|           |.|.:...||..|:....|:
Mosquito    77 ALHMKEH-----PDY-----------KYRPRRKPKPLVKSPTPNSA 106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgZNP_726106.1 HMG-box_SSRP1-like 8..72 CDD:438810 21/73 (29%)
LOC1271029XP_061513404.1 None

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