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Protein Alignment HmgZ and LOC108350839
DIOPT Version :9
Sequence 1: | NP_001286694.1 |
Gene: | HmgZ / 37480 |
FlyBaseID: | FBgn0010228 |
Length: | 111 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017448593.1 |
Gene: | LOC108350839 / 108350839 |
RGDID: | 11440908 |
Length: | 214 |
Species: | Rattus norvegicus |
Alignment Length: | 107 |
Identity: | 46/107 - (42%) |
Similarity: | 67/107 - (62%) |
Gaps: | 8/107 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 KRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELW--RGLKDKTEWEQKAIKMKEEYNKAVK 69
|||.||:.|:.:|.|.:||.::||..:.|:||:.||:| ..:.||...|:||.|:||:|.|.:.
Rat 96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWTNTAVDDKQPCEKKAAKLKEKYEKDIA 160
Fly 70 EYEANGGTDSGAPKKRKKAAAKPAKKAKKKESSEEEEEDESE 111
.|.|.|..|:. ||...| |:|:|||:..|::||||.|
Rat 161 AYRAKGKPDAA-----KKGVVK-AEKSKKKKEEEDDEEDEDE 196
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
HmgZ | NP_001286694.1 |
HMG_box |
6..71 |
CDD:395407 |
28/65 (43%) |
LOC108350839 | XP_017448593.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1641977at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000133 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.820 |
|
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