DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgZ and HMGXB4

DIOPT Version :9

Sequence 1:NP_001286694.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster
Sequence 2:XP_006724164.1 Gene:HMGXB4 / 10042 HGNCID:5003 Length:603 Species:Homo sapiens


Alignment Length:98 Identity:31/98 - (31%)
Similarity:53/98 - (54%) Gaps:14/98 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GDRPKRP-LSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKMKEEY 64
            |::||:. :|||.::..|.|..|..|:||....:::|:..|:|:.|  |||..|:|||..::.:.
Human   446 GEKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYLQHKQ 510

  Fly    65 NKAVKEYEANGGTDSGAPKKRKKAAAKPAKKAK 97
            |||           .....|||.::::.:.|.|
Human   511 NKA-----------EATTVKRKASSSEGSMKVK 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgZNP_001286694.1 HMG_box 6..71 CDD:395407 25/67 (37%)
HMGXB4XP_006724164.1 DUF4171 150..268 CDD:290491
HMG-box 450..513 CDD:238037 22/62 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1641977at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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