DRSC/TRiP Functional Genomics Resources

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Protein Alignment HmgZ and tox2

DIOPT Version :10

Sequence 1:NP_726106.1 Gene:HmgZ / 37480 FlyBaseID:FBgn0010228 Length:111 Species:Drosophila melanogaster
Sequence 2:XP_004918576.1 Gene:tox2 / 100124824 XenbaseID:XB-GENE-982431 Length:507 Species:Xenopus tropicalis


Alignment Length:103 Identity:30/103 - (29%)
Similarity:48/103 - (46%) Gaps:19/103 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKMKEEYNK 66
            :.|::|:|||.|:..:|:..||..||.:...|::|....:|..|  :.|..:::|....|:||.|
 Frog   244 NEPQKPVSAYALFFRDTQAAIKGQNPNATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLK 308

  Fly    67 AV---------KEYEANGGTDSGAPKKRKKAAAKPAKK 95
            |:         |.|...|.|        |.:.|..|.|
 Frog   309 ALAAYRASLVSKSYSEQGDT--------KNSQANQASK 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmgZNP_726106.1 HMG-box_SSRP1-like 8..72 CDD:438810 22/74 (30%)
tox2XP_004918576.1 HMG-box_TOX-like 247..316 CDD:438811 21/68 (31%)

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