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Protein Alignment HmgZ and sox17b.2
DIOPT Version :9
Sequence 1: | NP_001286694.1 |
Gene: | HmgZ / 37480 |
FlyBaseID: | FBgn0010228 |
Length: | 111 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001090837.1 |
Gene: | sox17b.2 / 100038235 |
XenbaseID: | XB-GENE-495335 |
Length: | 351 |
Species: | Xenopus tropicalis |
Alignment Length: | 104 |
Identity: | 23/104 - (22%) |
Similarity: | 51/104 - (49%) |
Gaps: | 22/104 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 RPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRG--LKDKTEWEQKAIKMKEEYNKA 67
|.:||::|:|:|..:.|:::.:.||.....:::|..|:.|:. |..|..:.::|.:::.::.:.
Frog 35 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLASKRPFVKEAERLRVQHIQD 99
Fly 68 VKEYEANGGTDSGAPKKRKKAAAKPAKKAKKKESSEEEE 106
..:| |.|.: :||:...|||
Frog 100 YPDY-----------KYRPR---------RKKQVKREEE 118
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1641977at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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