DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngB and Cnga3

DIOPT Version :10

Sequence 1:NP_611607.2 Gene:CngB / 37479 FlyBaseID:FBgn0266346 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_001385615.1 Gene:Cnga3 / 85257 RGDID:70948 Length:670 Species:Rattus norvegicus


Alignment Length:702 Identity:223/702 - (31%)
Similarity:346/702 - (49%) Gaps:101/702 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 CYNESP-ELQNEDRNER--TQRTPSINESEIVAVDEPDTEMNSDVDHRKPSSAGSLDSQGQQFLR 369
            |...|| :|..:|..:|  .|....:..|.     .|..|.:|.|........|.|....|....
  Rat     8 CSQPSPRQLSVKDAADRDLDQVENGLGRSH-----SPCEETSSTVHQGIVMETGELAGAAQSLFT 67

  Fly   370 DQVRHLVRRF--TARANKVKSRIELPPTPSS---------SSTVSSPSPPPTKSLHPSPQHKVRL 423
            .|....|.||  :.||...:......|||.|         ...|||..    ::..|:       
  Rat    68 SQGPARVSRFIISIRAWAARHLHHEDPTPDSFLDRFHGAELKEVSSQE----RNAQPN------- 121

  Fly   424 VPAGQSPHRGRLFEADTPRSNVWLCSSLCGANNDERTLDPQGKIYISWLCVVSLSFLYNAWVIPL 488
             |.||.|..|..                 |...|...:||...||..||..::|...||..::..
  Rat   122 -PGGQEPPEGGK-----------------GRKKDPIVVDPSSNIYYRWLTAIALPVFYNWCLLVC 168

  Fly   489 RASFPFQTKENTNIWLACDFCADIIYLLDVVFFKHRVMYLFEGFWVKNKNLTRKNYMRKLQFKLD 553
            ||.|.....|:..:||..|:.||.:|::|:: .:.|..:|.:|..|::.....|:|.:.|.||||
  Rat   169 RACFDELQSEHLTLWLVLDYSADALYVVDML-VRARTGFLEQGLMVRDTKRLWKHYTKTLHFKLD 232

  Fly   554 LLALLPLELLYFKLGTQAVWLRFPRFFKIQSFWEVFRLLDRVISSPHFVRVAKTLTYMLYMIHIT 618
            :|:|:|.:|.|.|||.....|||.|..:....:|.|...:...:.|:..|:...:.|.|.:||..
  Rat   233 ILSLIPTDLAYLKLGMNYPELRFNRLLRFSRLFEFFDRTETRTNYPNVFRIGNLVLYTLIIIHWN 297

  Fly   619 AALYYAYSDYQGLGQNRWVFSGKGHP--------YVRCFAFATKTATSIGKNPKPERQGEYVFMT 675
            |.:|:|.|.:.|.|.:.||:.....|        |:....::|.|.|:||:.|.|.:..||:|:.
  Rat   298 ACIYFAISKFIGFGTDSWVYPNTSKPEYGRLSRKYIYSLYWSTLTLTTIGETPPPVKDEEYLFVV 362

  Fly   676 VAWLMGVFVFALLIGQIRDIISTATRNKHEYRQLEDETLEYMRRLNLSQEVQSRVKMWFQFTWEQ 740
            :.:|:||.:||.::|.:..:||....::.|::...|...:||:...:::::::||..||.:.|..
  Rat   363 IDFLVGVLIFATIVGNVGSMISNMNASRAEFQAKIDSIKQYMQFRKVTKDLETRVIRWFDYLWAN 427

  Fly   741 QRTLDESNILDALPINLKTDIAISVHIQTLSKVQLFADCEEALLRDLVLKLRAVTFLPGDFVCRK 805
            ::|:||..:|..||..||.:|||:||:.||.||::|.|||..||.:||||||...|.|||::|:|
  Rat   428 RKTVDEKEVLKNLPDKLKAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLRPAVFSPGDYICKK 492

  Fly   806 GEVGREMYIVKLGQVQVMG--GPSSDVVLATLTEGSVFGEISLLGINGA---DRRTADVRSKGYS 865
            |::||||||:|.|::.|:.  |.:..||   |::||.|||||:|.|.|:   :||||::||.|||
  Rat   493 GDIGREMYIIKEGKLAVVADDGVTQFVV---LSDGSYFGEISILNIKGSKSGNRRTANIRSIGYS 554

  Fly   866 NLFVLSKSDLNEVIAYYPTAQAILKKRARQLMRKN------------AAREREEERERARSALQA 918
            :||.|||.||.|.:..||.|:..|:::.||::.|:            .||..||:.|...|:|..
  Rat   555 DLFCLSKDDLMETLTEYPDAKRALEEKGRQILMKDNLIDDDLVTARADARNIEEKVEYLESSLDG 619

  Fly   919 DVVIGNPKTPETAPKLLQTVIQALPFESPAVVLITRGSKRMRRKRQSVQMET 970
                            |||..        |.:|....:.:|:.|::..|:|:
  Rat   620 ----------------LQTRF--------ARLLAEYSASQMKLKQRLSQLES 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngBNP_611607.2 PLN03192 411..>891 CDD:215625 176/492 (36%)
CAP_ED 775..889 CDD:237999 62/118 (53%)
Cnga3NP_001385615.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 5/16 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..138 10/55 (18%)
Ion_trans 148..390 CDD:459842 76/242 (31%)
Ion conduction pathway. /evidence=ECO:0000250|UniProtKB:P29973 278..386 34/107 (32%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P29973 345..348 1/2 (50%)
C-linker. /evidence=ECO:0000250|UniProtKB:P29973 388..464 26/75 (35%)
CAP_ED 462..578 CDD:237999 62/118 (53%)
Cyclic nucleotide-binding domain. /evidence=ECO:0000250|UniProtKB:P29973 468..588 61/122 (50%)
CLZ 578..647 CDD:465160 19/92 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 644..670 2/4 (50%)

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