DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngB and CNGC8

DIOPT Version :10

Sequence 1:NP_611607.2 Gene:CngB / 37479 FlyBaseID:FBgn0266346 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_173408.2 Gene:CNGC8 / 838566 AraportID:AT1G19780 Length:753 Species:Arabidopsis thaliana


Alignment Length:689 Identity:145/689 - (21%)
Similarity:243/689 - (35%) Gaps:188/689 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 NDERTLDPQGKIYISWLCVVSLSFLYNAWVIPLRASFPFQTKENTNIWLACDFCA---------D 511
            ::::..|||.|..:.|..:..:|.:....|.||....|........|.:......         |
plant    93 SEKKIFDPQDKTLLLWNRMFVISCILAVSVDPLFFYLPIVDNSKNCIGIDSKLAVTTTTLRTIID 157

  Fly   512 IIYLLDVVFFKHRVMYLF-------EGFWVKNKNLTRKNYMRKLQFKLDLLALLPLELLYFKLGT 569
            :.||..:. .:.|..|:.       .|..|.:.....:.|:.: .|.:|.||:|||..:      
plant   158 VFYLTRMA-LQFRTAYIAPSSRVFGRGELVIDPAKIAERYLTR-YFIVDFLAVLPLPQI------ 214

  Fly   570 QAVWLRFPRFFKIQSFWEVF----RLLDRVISS--PHFVRV-------------------AKTLT 609
             |||    :|.......:|.    .||..||:.  |.|||.                   |....
plant   215 -AVW----KFLHGSKGTDVLPTKQALLHIVITQYIPRFVRFIPLTSELKKTAGAFAEGAWAGAAY 274

  Fly   610 YML-YMI--HITAALYY------------------------------------------------ 623
            |:| ||:  |||.|.:|                                                
plant   275 YLLWYMLASHITGAFWYMLSVERNDTCLRSACKVQPDPKVCVQILYCGSKLMSSRETDWIKSVPD 339

  Fly   624 -------AYSD-------------YQGLGQNRWVFSGKGHPYVRCFAFATKTATSIGKNPKPER- 667
                   |.||             ..|:..:...||    .:..|..:..:..:::|:..:... 
plant   340 LFKNNCSAKSDESKFNYGIYSQAVSSGIVSSTTFFS----KFCYCLWWGLQNLSTLGQGLQTSTY 400

  Fly   668 QGEYVFMTVAWLMGVFVFALLIGQIRDIISTATRNKHEYRQLEDETLEYMRRLNLSQEVQSRVKM 732
            .||.:|.....:.|:.:||||||.::..:.:.|....|.|....::.::|...:|.|.::.||:.
plant   401 PGEVLFSIAIAVAGLLLFALLIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRSLPQNLRERVRR 465

  Fly   733 WFQFTWEQQRTLDESNILDALPINLKTDIAISVHIQTLSKVQLFADCEEALLRDLVLKLRAVTFL 797
            :.|:.|.:.|.:||.||:.:||.:|:.||...:.:..:.:|.|||:.:|.||..:..:|:...:.
plant   466 YDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYT 530

  Fly   798 PGDFVCRKGEVGREMYIV---KLGQVQVMGGPSSDVVLATLTEGSVFGEISL-------LGINGA 852
            ...::.|:|:...||..:   :|..|...||.|.......|.||...||..|       .|.| .
plant   531 ESTYIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSN-L 594

  Fly   853 DRRTADVRSKGYSNLFVLSKSDLNEVIAYY-------------------PTAQAILKKRA--RQL 896
            ...|..|::......|.|...:|..|.:.:                   .|..|...:.|  |.|
plant   595 PSSTRTVKALTEVEAFALEAEELKFVASQFRRLHSRQVQQTFRFYSQQWRTWAACFIQAAWRRHL 659

  Fly   897 MRKNAAREREEERERARS--------------ALQADVVIGNPKTPETAPKLLQTVIQALPFESP 947
            .||.|...|:||.|....              ..::|..:|:..|       |::.:.|..|.:.
plant   660 RRKIAELRRKEEEEEEMDYEDDEYYDDNMGGMVTRSDSSVGSSST-------LRSTVFASRFAAN 717

  Fly   948 AVVLITRGSKRMRRKRQSVQMETIVEPKMEVTGAAETQD 986
            |:    :|.| :|....|..:..:.:|......|.:|.|
plant   718 AL----KGHK-LRVTESSKSLMNLTKPSEPDFEALDTDD 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngBNP_611607.2 PLN03192 411..>891 CDD:215625 120/576 (21%)
CAP_ED 775..889 CDD:237999 32/142 (23%)
CNGC8NP_173408.2 PLN03192 155..>579 CDD:215625 96/440 (22%)
CAP_ED 508..639 CDD:237999 30/131 (23%)

Return to query results.
Submit another query.