DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngB and CNGC4

DIOPT Version :10

Sequence 1:NP_611607.2 Gene:CngB / 37479 FlyBaseID:FBgn0266346 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_200236.1 Gene:CNGC4 / 835513 AraportID:AT5G54250 Length:694 Species:Arabidopsis thaliana


Alignment Length:545 Identity:104/545 - (19%)
Similarity:187/545 - (34%) Gaps:173/545 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   437 EADTPRSNVWLCSSLCG------ANNDE-----RTLDPQGKIYISW------LCVVSL----SFL 480
            |.:.||..:     .||      :||::     |.|||:.|....|      :|...|    .||
plant    50 EEEDPRIGL-----TCGGRRNGSSNNNKWMMLGRILDPRSKWVREWNKVFLLVCATGLFVDPLFL 109

  Fly   481 YNAWVIPLRASFPFQTKENTNI------WLACDFCA-----DIIYLLDV-VFFKHRVMYLF---- 529
            |...|            .:|.:      |||....|     |:::|.:: :.||....:.:    
plant   110 YTLSV------------SDTCMCLLVDGWLALTVTALRSMTDLLHLWNIWIQFKIARRWPYPGGD 162

  Fly   530 ------EGFWVKNKNLTRKNYMRKLQFKLDLLALLPLELLYFKLGTQAVWLRFPRFFKIQSFWEV 588
                  :|...:........|::|..|..||..:|||..:       .:|:..|...|..|...|
plant   163 SDGDTNKGGGTRGSTRVAPPYVKKNGFFFDLFVILPLPQV-------VLWVVIPSLLKRGSVTLV 220

  Fly   589 ---------FRLLDRVISSPHFVRVAKTLTYMLY----------MI------HITAALYYAYS-- 626
                     |:.|.::..|...:|...||:..::          ||      |...|.:|...  
plant   221 VSVLLVTFLFQYLPKIYHSIRHLRRNATLSGYIFGTVWWGIALNMIAYFVAAHAAGACWYLLGVQ 285

  Fly   627 --------------------------DYQG-----LGQNRWVFSGKGHPYVRCFAFATK------ 654
                                      .|.|     |.:.|..::........|....|.      
plant   286 RSAKCLKEQCENTIGCDLRMLSCKEPVYYGTTVMVLDRARLAWAQNHQARSVCLDINTNYTYGAY 350

  Fly   655 -------------------------TATSIGKNPKPERQGEYVFMTVAWLMGVFVFALLIGQIRD 694
                                     |.::.|.........|.||..:....|:.:..:|||.|: 
plant   351 QWTIQLVSSESRLEKILFPIFWGLMTLSTFGNLESTTEWSEVVFNIIVLTSGLLLVTMLIGNIK- 414

  Fly   695 IISTATRNKHEYRQLEDETLE-YMRRLNLSQEVQSRVKMWFQFTWEQQRTLDESNILDALPINLK 758
            :...||.:|.:...|:...:| :|::.:|....:.||:.:.:..|...|.:||..::..||..|:
plant   415 VFLHATTSKKQAMHLKMRNIEWWMKKRHLPIGFRQRVRNYERQRWAAMRGVDECEMVQNLPEGLR 479

  Fly   759 TDIAISVHIQTLSKVQLFADCEEALLRDLVLKLRAVTFLPGDFVCRKGEVGREMYIVKLGQVQ-- 821
            .||...:.:..:.:|.||...::.:|.::..:::::.|..|:.:.::|:..:.|..|..|.:|  
plant   480 RDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRGHLQSS 544

  Fly   822 ----------VMGGP---SSDVVLA 833
                      .|.||   |.|.:|:
plant   545 QLLRDGVKSCCMLGPGNFSGDELLS 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngBNP_611607.2 PLN03192 411..>891 CDD:215625 104/545 (19%)
CAP_ED 775..889 CDD:237999 16/74 (22%)
CNGC4NP_200236.1 PLN03192 <370..>565 CDD:215625 43/195 (22%)
CAP_ED 496..602 CDD:237999 16/74 (22%)

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