DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngB and CNGC13

DIOPT Version :10

Sequence 1:NP_611607.2 Gene:CngB / 37479 FlyBaseID:FBgn0266346 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_192010.2 Gene:CNGC13 / 826427 AraportID:AT4G01010 Length:696 Species:Arabidopsis thaliana


Alignment Length:616 Identity:119/616 - (19%)
Similarity:220/616 - (35%) Gaps:173/616 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   453 GANNDER-----------TLDPQGKIYISWLCVVSLSFLYNAWVIPLRASFPFQTKE------NT 500
            |::|.:|           .::|||....:|..:...:.:....:.||....|....|      :.
plant    50 GSHNKKRDSNSSTTTQKNIINPQGSFLQNWNKIFLFASVIALAIDPLFFYIPIVDGERHCLNLHR 114

  Fly   501 NIWLACDFC---ADIIYLLDVVFFKHRVMYLF-------EGFWVKNKNLTRKNYMRKLQFKLDLL 555
            |:.:|....   .|..|::.:| |:.|..|:.       .|..|.:.......|:.. .|.:|||
plant   115 NLEIAASVLRTFIDAFYIIHIV-FQFRTAYISPSSRVFGRGELVDDPKAIAIKYLSS-YFIIDLL 177

  Fly   556 ALLPL---------------------ELLYFKLGTQAVWLRFPRFFKIQSFWEVFRLLDRVISSP 599
            ::|||                     :.|...:.||.:    ||..:|...:........:::..
plant   178 SILPLPQLVVLAVIPNVNKPVSLITKDYLITVIFTQYI----PRILRIYPLYTEVTRTSGIVTET 238

  Fly   600 HFVRVAKTLTYMLYMI--HITAALYY--------------------------AYSDYQGLGQNRW 636
            .:...|..|:  |||:  |:..||:|                          .|.|  |....|.
plant   239 AWAGAAWNLS--LYMLASHVFGALWYLISVEREDRCWREACEKIPEVCNFRFLYCD--GNSSVRN 299

  Fly   637 VFSGKGHPYVR-----------------------------------CFAFATKTATSIGKNPKPE 666
            .|.....|::.                                   ||.:..:..:::|:|....
plant   300 DFLTTSCPFINPDDITNSTVFNFGIFTDALKSGIVESDDFWKKFFYCFWWGLRNLSALGQNLNTS 364

  Fly   667 R-QGEYVFMTVAWLMGVFVFALLIGQIRDIISTATRNKHEYRQLEDETLEYMRRLNLSQEVQSRV 730
            : .||.:|.....:.|:.:||||||.::..:.:.|..:.|.|..:.:..::|....|..:::.|:
plant   365 KFVGEIIFAVSICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQWMSHRMLPDDLRKRI 429

  Fly   731 KMWFQFTWEQQRTLDESNILDALPINLKTDIAISVHIQTLSKVQLFADCEEALLRDLVLKLRAVT 795
            :.:.|:.|::.|.::|.|:|..||.:|:.||.....:..|.||.||...:|.||..:..||:.|.
plant   430 RRYEQYKWQETRGVEEENLLRNLPKDLRRDIKRHFCLDLLKKVPLFEIMDEQLLDAVCDKLKPVL 494

  Fly   796 FLPGDFVCRKGEVGREMYIVKLGQVQVMGGPSSDVVLATLTEGSVFGEISLLGINGAD------- 853
            :....:..|:|:...||..|..|:           :::..|.|...|..:.:.:..:|       
plant   495 YTENSYAIREGDPVEEMLFVMRGK-----------LMSATTNGGRTGFFNAVYLKPSDFCGEDLL 548

  Fly   854 -------------RRTADVRSKGYSNLFVLSKSDLNEVIA---------------YYPT-----A 885
                         ..|..|::......|.|:..||..|.:               :|..     .
plant   549 TWALDPQSSSHFPISTRTVQALTEVEAFALAADDLKLVASQFRRLHSKQLQHTFRFYSVQWRTWG 613

  Fly   886 QAILKKRARQLMRKNAAREREEERERARSAL 916
            .:.::...|:..|:..||...||.:|.|:|:
plant   614 ASFIQAAWRRHCRRKLARSLTEEEDRFRNAI 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngBNP_611607.2 PLN03192 411..>891 CDD:215625 110/589 (19%)
CAP_ED 775..889 CDD:237999 26/153 (17%)
CNGC13NP_192010.2 PLN03192 16..>492 CDD:215625 91/451 (20%)
CAP_ED 474..605 CDD:237999 25/141 (18%)

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