DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngB and SKOR

DIOPT Version :10

Sequence 1:NP_611607.2 Gene:CngB / 37479 FlyBaseID:FBgn0266346 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_186934.1 Gene:SKOR / 821052 AraportID:AT3G02850 Length:828 Species:Arabidopsis thaliana


Alignment Length:531 Identity:120/531 - (22%)
Similarity:225/531 - (42%) Gaps:89/531 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   463 PQGKIYISWLCVVSLSFLYNAWVIPLRASFPFQTKENTNIWLACDFCADIIYLLDVV--FF---- 521
            |..:.|.:|...:.:..||:::..||...|.....||..|   .|....|.:|:|:|  ||    
plant    77 PDNRWYKAWTMFILIWALYSSFFTPLEFGFFRGLPENLFI---LDIAGQIAFLVDIVLTFFVAYR 138

  Fly   522 ---KHRVMYLFEGFWVKNKNLTRKNYMRKLQFKLDLLALLPLELLYFKLG--TQAVWLRFPRFFK 581
               .:|::|       |..::..: |: |..|.:||||.:|.:::|...|  .:..:|...|.::
plant   139 DSRTYRMIY-------KRSSIALR-YL-KSTFIIDLLACMPWDIIYKAAGEKEEVRYLLLIRLYR 194

  Fly   582 IQSFWEVFRLLDRVISSPH-FVRVAKTLTYMLYMIHITAALY----------------------- 622
            :......|..:::.|...: |.|:.|.:...||..|..|.::                       
plant   195 VHRVILFFHKMEKDIRINYLFTRIVKLIFVELYCTHTAACIFYYLATTLPASQEGYTWIGSLKLG 259

  Fly   623 -YAYSDYQGLGQNRWVFSGKGHPYVRCFAFATKTATSIGKNP-KPERQGEYVFMTVAWLMGVFVF 685
             |:||.::.:  :.|.      .|.....||..|..::|... ......|.:|..|.....:.:.
plant   260 DYSYSKFREI--DLWT------RYTTSMYFAVVTMATVGYGDIHAVNMREMIFAMVYISFDMILG 316

  Fly   686 ALLIGQIRDIISTATRNKHEYRQLEDETLEYMRRLNLSQEVQSRVKMWFQFTWEQQRTLDESNIL 750
            |.|||.:..:|...::.: .:|....:.:.||.|..|.:.::.::....:..:|...|  |:.:|
plant   317 AYLIGNMTALIVKGSKTE-RFRDKMADIMRYMNRNKLGRNIRGQITGHLRLQYESSYT--EAAVL 378

  Fly   751 DALPINLKTDIAISVHIQTLSKVQLFADCEEALLRDLVLKLRAVTFLPGDFVCRKGEVGREMYIV 815
            ..:|::::..||.::::..:.||.||..|....:..:|::|....||||:.:..:|.|..::|.|
plant   379 QDIPVSIRAKIAQTLYLPYIEKVPLFRGCSSEFINQIVIRLHEEFFLPGEVIMEQGSVVDQLYFV 443

  Fly   816 KLGQVQVMG--GPSSDVVLATLTEGSVFGEISLLGINGADRRTADVRSKGYSNLFVLSK-SDLNE 877
            ..|.::.:|  ...|:.::|.|.....|||||:| .|.....|  ||......:..|.| |.:|.
plant   444 CHGVLEEIGITKDGSEEIVAVLQPDHSFGEISIL-CNIPQPYT--VRVAELCRILRLDKQSFMNI 505

  Fly   878 VIAYYPTAQAILKKRARQLMRKNAAREREEERERARSALQADVVIG-NPKTPETAPKL------- 934
            :..::...:.||          |...|.:|...|.:. |::|:... :.:..|.|.||       
plant   506 LEIFFHDGRRIL----------NNLLEGKESNVRIKQ-LESDITFHISKQEAELALKLNSAAFYG 559

  Fly   935 ----LQTVIQA 941
                |:::|:|
plant   560 DLYQLKSLIRA 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngBNP_611607.2 PLN03192 411..>891 CDD:215625 107/467 (23%)
CAP_ED 775..889 CDD:237999 32/116 (28%)
SKORNP_186934.1 PLN03192 70..827 CDD:215625 120/531 (23%)
ANK repeat 580..611 CDD:293786
ANK repeat 613..644 CDD:293786
ANK repeat 677..708 CDD:293786
Blue background indicates that the domain is not in the aligned region.

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