DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngB and SPIK

DIOPT Version :10

Sequence 1:NP_611607.2 Gene:CngB / 37479 FlyBaseID:FBgn0266346 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_180131.3 Gene:SPIK / 817099 AraportID:AT2G25600 Length:888 Species:Arabidopsis thaliana


Alignment Length:684 Identity:137/684 - (20%)
Similarity:240/684 - (35%) Gaps:200/684 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   453 GANNDE-----------RTLDPQGKIYISWLCVVSLSFLYNAWVIPLRASF------PFQTKEN- 499
            ||||..           ...||:   |.:|...:....||.||..|....|      |....:| 
plant    57 GANNRSSRDVILPRFIVSPFDPR---YRAWETFLVFLVLYTAWASPFEFGFLQKPRPPLSILDNI 118

  Fly   500 TNIWLACD--------FCADIIYLLDVVFFKHRVMYLFEGFWVKNKNLTRKNYMRKLQFKLDLLA 556
            .|.:.|.|        |...:.|||  |....|:.:.:...|:                ..|:::
plant   119 VNGFFAVDIVLTFFVAFLDKVTYLL--VDDPKRIAWRYASTWL----------------IFDVVS 165

  Fly   557 LLPLE----LLYFKLGTQAVWLRFPRFFKIQSFWEVFRLLDRVISSPHF-VRVAKTLTYMLYMIH 616
            ..|.|    ||:..:....::... |.::::.....|..|::.....:| ||.:|.|...|::||
plant   166 TFPYEIFGSLLHESIQGYGIFSML-RLWRLRRVSNCFARLEKDRKYSYFWVRCSKLLLVTLFVIH 229

  Fly   617 ITAALYYA----YSD----YQGLGQNRWVFSGKGHP---------YVRCFAFATKTATSI-GKNP 663
            ..|...|:    |.|    :..|....|    |..|         |.....|:|.....| |.|.
plant   230 CGACFLYSIAAHYPDPSKTFMALTDENW----KESPIAVRYNTAMYWSITTFSTTGYGDIHGVNS 290

  Fly   664 KPERQGEYVFMTVAWLMGVFVFALLIGQIRDIISTATRNKHEYRQLEDETLEYMRRLNLSQEVQS 728
            :     |..|:....:..:.:.|.:||.:.:::...|....::|........:.:|.||...:|.
plant   291 R-----EMTFILFYMVFNLGLSAYIIGNMTNLVVHVTGRTRKFRDTIQAASGFGQRNNLPVRLQD 350

  Fly   729 RV--KMWFQFTWEQQRTLDESNILDALPINLKTDIAISVHIQTLSKVQLFADCEEALLRDLVLKL 791
            ::  .:..::..:.: .|.:..|:|:||..:::.|:..:..:.:.|:.||......||..||.::
plant   351 QMVAHLCLRYRTDSE-GLQQQEIIDSLPKAIRSSISHYLFYEVVDKIYLFHGISNDLLFQLVTEM 414

  Fly   792 RAVTFLPGDFVCRKGEVGREMYIVKLGQVQVMGGPSS-DVVLATLTEGSVFGEISLLGINGADRR 855
            :|..|.|.:.|..:.|...:.||:..|.|.::...:. :.|::....|.||||:.          
plant   415 KAEYFPPKEDVILQNEAPTDFYILVTGAVDIIARVNGVEQVVSEAQRGHVFGEVG---------- 469

  Fly   856 TADVRSKGYSNLFVLSKSDLNEVIAYYPTAQAILKKRARQLMRKNAAREREEERERARSALQADV 920
                                  |:.|.|....:..||..||:|.|        |....:.:||:|
plant   470 ----------------------VLCYRPQLFTVRTKRLSQLLRLN--------RTVLLNLVQANV 504

  Fly   921 ----VIGNPKTPETAPKLLQTVIQALPFESPAVVLITRGSKRMRRKRQSVQMETIVEPKMEVT-- 979
                :|.|        .|||.:..:   |.|.:..:...::.|           :.:.||::.  
plant   505 GDGAIIMN--------NLLQHLKDS---EDPVMKGVLADTEHM-----------LAQGKMDLPLS 547

  Fly   980 ---GAAETQD-------QKGL------KTGRCSPDLLSSIQQELKSKHKFI----------NLTD 1018
               .||...|       ::|.      |.||.:..:.:|     |..|..:          |:.|
plant   548 LCFAAARGDDLLLHQLLRRGSSPNEMDKDGRTALHIAAS-----KGSHYCVVLLLEHGADPNIRD 607

  Fly  1019 SE-----------------KALISQSANNSLEDM 1035
            ||                 |.|....|..||:.:
plant   608 SEGNVPLWEAIIGRHREIAKLLAENGAKLSLDSV 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngBNP_611607.2 PLN03192 411..>891 CDD:215625 98/489 (20%)
CAP_ED 775..889 CDD:237999 24/114 (21%)
SPIKNP_180131.3 PLN03192 38..888 CDD:215625 137/684 (20%)
ANK repeat 548..574 CDD:293786 4/25 (16%)
ANK repeat 576..607 CDD:293786 6/35 (17%)
ANK repeat 609..671 CDD:293786 6/33 (18%)
ANK repeat 673..704 CDD:293786
Blue background indicates that the domain is not in the aligned region.

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